Page No. 13
If the selected window size is too long, sensitivity of the alignment is lost.
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A problem exists when comparing _____ sequences using the dot matrix method, namely, the _______
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In a dot matrix, two sequences to be compared are written in the _____________
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In local alignment, the two sequences to be aligned cannot be of unequal lengths.
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The major disadvantage of the PRSS program is that it doesn’t allow partial shuffling.
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Which of the following is untrue about the PRSS program?
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It is not known whether the Gumble distribution applies equally well to gapped alignments.
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